TGen Bioinformatics Research Unit Software

This page lists bioinformatics software developed and distributed by the TGen Bioinformatics Research Unit.

GenePool

A software suite for analysis of genome-wide association using microarray-based SNP genotyping of pooled genomics DNA

BioParser Project

The BioParser Project provides text-to-object parsers for common Bioinformatics data sources including NCBI LocusLink, UniGene, GenBank and OMIM.

TGen-Array

TGen-Array is a collection of perl scripts and modules that provide parsing and object-oriented interfaces for common microarray files.

TGen-EUtils

TGen-EUtils is a collection of perl scripts and modules that provides an object-oriented interface to the NCBI Entrez Programming Utilities (eUtils).

TGen-POD2HTML

TGen-POD2HTML is a collection of perl scripts and modules that provide a system for generating deployment-ready webpages from the POD documentation found in perl scripts and modules.

TGenBioinfPerl

TGenBioinfPerl is a collection of perl utility modules that may be required by some of the other perl software distributed on this page.